Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaethon_20lepturus_20[refseq_20GCF_5F000687285.1_202014-05-08] 66,785 sequences; 1,152,958,507 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq44438 95.1 5e-17 seq61083 89.7 2e-15 seq11504 80.6 1e-12 >seq44438 Length=73843 Score = 95.1 bits (104), Expect = 5e-17 Identities = 96/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| ||| ||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 7674 GAGTCGGGTTCCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCCTCTAAGGCTAAAT 7615 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | || |||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 7614 ACCAGCACGAGACCGATAGCCAACAAGTACTGTAAGGGAAAGTTGAAAAGAACTTTG--A 7557 Query 160 AGAG 163 |||| Sbjct 7556 AGAG 7553 >seq61083 Length=306 Score = 89.7 bits (98), Expect = 2e-15 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 59 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGG 1 >seq11504 Length=6809 Score = 80.6 bits (88), Expect = 1e-12 Identities = 68/84 (81%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 |||| |||||||||||||||||||||||||| | |||||| ||| |||| |||||| | Sbjct 48 AGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCTGTAGCGGTCCTGACGTGTAAATCGGT 107 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 |||| | | || ||||||||| Sbjct 108 CGTCCGACCCGTGTCTAGGGGCGA 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078567461750