Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaethon_20lepturus_20[refseq_20GCF_5F000687285.1_202014-05-08] 66,785 sequences; 1,152,958,507 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq31727 127 3e-27 seq32929 113 7e-23 seq15888 104 4e-20 seq18616 78.8 1e-12 >seq31727 Length=63353 Score = 127 bits (140), Expect = 3e-27 Identities = 88/100 (88%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||| ||||||||||||||||||||||| |||| ||||||||||||||| |||||||| Sbjct 62403 GTCTTGTTCGTTATCGGAATTAACCAGAGAAATTGTTCCACCAACTAAGAATGGCCATGC 62344 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||| ||| |||||||||| |||||||||| Sbjct 62343 ACCACCACCCACTGAACTGAGAAAGAGCTCTCAATCTGTC 62304 >seq32929 Length=13691 Score = 113 bits (124), Expect = 7e-23 Identities = 87/101 (86%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||||||||||||||||| | || ||||||||||||||||||||||||||| || Sbjct 13198 GTCAGTGTAGCGCGCGTGCGGCCCCGGACGTCTAAGGGCATCACAGACCTGTTATTG-CT 13140 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||| | || |||||| | |||| | |||||||| ||||| Sbjct 13139 CAATC-TCGGGTGGCTGAACGCCACTTGTCCCTCTGAGAAG 13100 >seq15888 Length=43926 Score = 104 bits (114), Expect = 4e-20 Identities = 155/216 (72%), Gaps = 12/216 (6%) Strand=Plus/Minus Query 48 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCAT-TGGCTGGAAGCCAATAGTCCC 106 ||||||||||||||| |||| ||| || | || ||| | | || | |||| | ||||| Sbjct 20906 AAGGGCATCACAGACTTGTTGCTGC-TCTATCT--CATGTTGTTGAATGCCACTTGTCCC 20850 Query 107 TCTAAGAAGCCAGCCACCAACCAT----AGTCGATGGGGCTATTTAGCAGGTTAAGGTCT 162 | || ||| | || ||||||| || | ||| |||| | | | |||| Sbjct 20849 TTGAAAAAGTTGGACATCAACCATTGGGAGGTCTTATAACTAGTTAGAATGCCAGAGTCT 20790 Query 163 CGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCA 222 ||| |||| |||||||||||||||||| ||| |||||| ||| ||||| | |||| Sbjct 20789 TGTTTTTTATTGGAATTAACCAGACAAATTACTTCACCAA----GAATGGCCAGGTACCA 20734 Query 223 CCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||| ||| ||||||||| |||||||||| Sbjct 20733 CCACCCATGGAACTGTGAAAGAGCTCTCAATCTGTC 20698 >seq18616 Length=60135 Score = 78.8 bits (86), Expect = 1e-12 Identities = 49/53 (92%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 170 TATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCA 222 |||||||||||||||||| ||| |||||||| |||||||||||||||||||| Sbjct 34279 TATCGGAATTAACCAGACCAATTGCTCCACCAGCTAAGAACGGCCATGCACCA 34227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796284486585