Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaethon_20lepturus_20[refseq_20GCF_5F000687285.1_202014-05-08] 66,785 sequences; 1,152,958,507 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq32929 188 1e-45 >seq32929 Length=13691 Score = 188 bits (208), Expect = 1e-45 Identities = 201/259 (78%), Gaps = 5/259 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||| |||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 13100 CTTCTCAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 13157 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||| || | |||||||||||||||||||||||| | || | || | | Sbjct 13158 ATGCCCTTAGACGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 13217 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT-CTGTCGTGCTGGGGATAGAGCATT 249 ||| ||||| ||| |||||||| ||| |||| | ||||| ||||||| | | ||| Sbjct 13218 CCTCCGCCGGCAGGCGCGGGTAATC-CGTTGAACTCCATTCGTGATGGGGATCGGGGATT 13276 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 |||||| || | | | || ||||||| || |||||| ||| ||||| || ||||||||| Sbjct 13277 GCAATTCTTCCCCGTGAATGAGGAATTCCCAGTAAGTGCGGGTCATAAGATCGCGTTGAT 13336 Query 310 TACGTCCCTGCCCTTTGTA 328 || |||||||||||||||| Sbjct 13337 TAAGTCCCTGCCCTTTGTA 13355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946567412480