Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalacrocorax_20carbo_20[refseq_20GCF_5F000708925.1_202014-06-17] 64,312 sequences; 1,138,967,842 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq60929 127 9e-27 seq30099 86.0 3e-14 >seq60929 Length=446 Score = 127 bits (140), Expect = 9e-27 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 263 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 204 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| |||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 203 ACCGGCACGAGACCGATAGCCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 144 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||| | ||| || || Sbjct 143 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 104 >seq30099 Length=6917 Score = 86.0 bits (94), Expect = 3e-14 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||| | |||| ||||||||||||| | || |||| |||||| | | ||||| | ||||| Sbjct 4806 GAGTAGGGTTGCTTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGTTAAAT 4747 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 | |||| |||| |||||| |||||||| | | ||||| |||||| | |||| Sbjct 4746 ACTGGCACAAGACTGATAGCCCACAAGTACCATAAGGGAAAGCTGAAAAAAAGTTTG 4690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078620507600