Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014 -05-08] 76,189 sequences; 1,132,184,511 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq43345 78.8 2e-12 >seq43345 Length=27847 Score = 78.8 bits (86), Expect = 2e-12 Identities = 107/148 (72%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 140 GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGA 199 ||||||||| | | |||||||||||||||||| | | | | || ||||| ||||| Sbjct 25494 GAATAGGAC-TCCTGTTCTATTTTGTTGGTTTTTGGAAACAGGACCATCATTAAGAGGGA 25552 Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259 | | | |||| | ||||| || |||||||||||||||||| | || ||||| Sbjct 25553 TGGCCAGGGGCATTTGTATTGTGCTGCTAGAGGTGAAATTCTTGGACTGATGCAAGACGG 25612 Query 260 ACTACTGCGAAAGCGTTCACCAAGGATG 287 ||| |||||||| || ||||| ||| Sbjct 25613 CCTAGAGCGAAAGCATTTGCCAAGAATG 25640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914502718272