Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014 -05-08] 76,189 sequences; 1,132,184,511 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq41538 111 3e-22 seq18521 89.7 8e-16 >seq41538 Length=608 Score = 111 bits (122), Expect = 3e-22 Identities = 80/94 (85%), Gaps = 9/94 (10%) Strand=Plus/Minus Query 165 TTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACC 224 ||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 360 TTCGTTATCGGAATTAACCG---------CTCCACCAACTAAGAACGGCCATGCACCACC 310 Query 225 ACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||| ||||| |||||||||| |||||||||| Sbjct 309 ACCCACGGAATCGAGAAAGAGCTCTCAATCTGTC 276 >seq18521 Length=52400 Score = 89.7 bits (98), Expect = 8e-16 Identities = 82/101 (81%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||| || ||| |||| | ||||||||||||||| |||||||||||||| || Sbjct 46558 GTCAGTGTAGCACGTGTGAAGCCCTGGACATCTAAGGGCATCGCAGACCTGTTATTG-CT 46500 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 || | || ||||| | |||| | |||||||||||||| Sbjct 46499 CAGTC-TCGGGCGGCTGAATGCCACTTGTCCCTCTAAGAAG 46460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796211897109