Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenicopterus_20ruber_20ruber_20[genbank_20GCA_5F000687265.1_202014 -05-08] 76,189 sequences; 1,132,184,511 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq18521 127 4e-27 >seq18521 Length=52400 Score = 127 bits (140), Expect = 4e-27 Identities = 186/258 (72%), Gaps = 4/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | ||||| || | |||| |||||||||||||| | Sbjct 46460 CTTCTTAGAGGGACAAGTGGCATTCAGCCGCCCGA-GACTGAG-CAATAACAGGTCTGCG 46517 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||| || ||||||||||||| || | || | Sbjct 46518 ATGCCCTTAGATGTCCAGGGCTTCACACGTGCTACACTGACAGCTCC-GCTTGTGCCCAC 46576 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| |||| || ||||| || | |||| | |||| ||||||| | |||| Sbjct 46577 CCTCCACCGGCGGGCGCAGGTAACCTGTTGAAACCCATCCGTGATGGGGATCAGGGATTG 46636 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | |||||||||| || |||||| | | ||||| | | | | |||||| Sbjct 46637 CAATTCTTCCCTGTGAACGAGGAATTCCCAGTAAGTGTGGGTCATAAACTCACATTGATT 46696 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||| |||||| Sbjct 46697 AATTCCCTGCCATTTGTA 46714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946478337792