Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016- 06-02] 308,480 sequences; 997,399,373 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq233878 86.0 3e-14 >seq233878 Length=290 Score = 86.0 bits (94), Expect = 3e-14 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 |||| |||||| || | ||||| |||||||||||| |||| |||| |||| |||| Sbjct 84 GAGTGTGAGCATCCGTGCTAGGACCTGAAAGATGGTGAGCTATCCCTGGGCAGGGCGAAG 25 Query 609 CCAGAGGAAACTCTGGTGGAGG 630 |||||||||||||||||||||| Sbjct 24 CCAGAGGAAACTCTGGTGGAGG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2073383104000