Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picoides_20pubescens_20[refseq_20GCF_5F000699005.1_202014-06-06] 31,254 sequences; 1,167,323,935 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq248 87.8 2e-15 >seq248 Length=537846 Score = 87.8 bits (96), Expect = 2e-15 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 2 GTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTA 61 || ||| |||||||||||| || || | ||||||||| |||||||| ||| ||| Sbjct 1166 GTTTCTGAAAACCAACAAAACAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCAGTA 1224 Query 62 TTCGGGCGTAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | | |||| | |||||||||||||||||||||||||||| ||||| || Sbjct 1225 TGCCGGCGGCCGGCCTGCTTTGAACACTCTAATTTTCTCAAAGTAAATGT 1274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595019789436