Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Podiceps_20cristatus_20[genbank_20GCA_5F000699545.1_202014-06-11] 82,923 sequences; 1,134,922,578 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq25748 93.3 6e-17 >seq25748 Length=147177 Score = 93.3 bits (102), Expect = 6e-17 Identities = 143/200 (72%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||| |||||||| |||| | |||||||| |||| ||| Sbjct 74874 GTACAAAGGGCAGGGACTTAATCAACACGAGCTTG-TGACCCACGCTTACTGGGAA-TTC 74931 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG-ATGAAATTTCAAAGATT 119 || ||| | | || || ||| || | |||||||||||| ||| || | | | Sbjct 74932 CTTGTTCATGGGGAAGAACTGCGATCCCCAATCCCCATCACGAATGGGGTTCAATGGGCT 74991 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 || || |||| ||| ||| || | ||| |||| |||||| | ||||| Sbjct 74992 ACTCGCGCCTGCTGGCAGAGGGTGGGCACAAGCTGAGCCAGTCAGGGTAGCGTGTGTGCG 75051 Query 180 GCCCAGAACATCTAAGGGCA 199 |||| | ||||||||||||| Sbjct 75052 GCCCCGGACATCTAAGGGCA 75071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751395905945