Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Podiceps_20cristatus_20[genbank_20GCA_5F000699545.1_202014-06-11] 82,923 sequences; 1,134,922,578 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq65150 80.6 3e-13 >seq65150 Length=182698 Score = 80.6 bits (88), Expect = 3e-13 Identities = 121/168 (72%), Gaps = 8/168 (5%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || ||||| |||||||| || | |||||| ||||||| ||| || || |||| Sbjct 128074 CGAAAACGAACACACGTGATCAAGGAGAATATCCTAAGGCTAACGAGATAACTACAGTTA 128133 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141 ||||||| ||||| | | |||||||||||||| |||| || |||| | | | | Sbjct 128134 AGGAACTCTGCAAAATAGCTCTGTAACTTCGGGAGAAAGAGTACCTATTTAAATAAAATA 128193 Query 142 GGGCGCAG---AGAAT-AGGTCCAGGCAACTGTTTAACAAAAACACAG 185 || | ||| ||||| ||| | || |||||||||||||||||||| Sbjct 128194 GGTCACAGTAAAGAATGAGGGC--GG--ACTGTTTAACAAAAACACAG 128237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530773278242