Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Podiceps_20cristatus_20[genbank_20GCA_5F000699545.1_202014-06-11] 82,923 sequences; 1,134,922,578 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq56606 105 7e-21 seq65150 91.5 2e-16 >seq56606 Length=2185 Score = 105 bits (116), Expect = 7e-21 Identities = 125/178 (70%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||||||| |||| | | ||||||| || | ||||||| ||| Sbjct 1388 GGGTCTTTCCGTCCCATAGCGGCAAGAGAGTGTCTTCACTCTCACCAGGATTTCACCGAG 1329 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 || || ||||||| |||||||||| || || |||||||||||||| Sbjct 1328 TCTACAGTCGAGACAGTCAAGAGCTGGTTACACCATTCAAGCGGGACGGAACTTACCCGA 1269 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1268 CAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 1211 >seq65150 Length=182698 Score = 91.5 bits (100), Expect = 2e-16 Identities = 107/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||||||| |||| | | ||||||| || | ||||||| ||| Sbjct 128518 GGGTCTTTCCGTCCCATAGCGGCAAGAGAGTGTCTTCACTCTCACCAGGATTTCACCGAG 128459 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 || || ||||||| |||||||||| || || | ||| ||||| || Sbjct 128458 TCTACAGTCGAGACAGTCAAGAGCTGGTTACACCATTCAAGCGGGACAGAATTTACCTGA 128399 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||| Sbjct 128398 CAAGGAATTTCGCTACCTTAGGACCGTTA 128370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546760425177