Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Podiceps_20cristatus_20[genbank_20GCA_5F000699545.1_202014-06-11] 82,923 sequences; 1,134,922,578 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq17879 140 7e-31 >seq17879 Length=41821 Score = 140 bits (154), Expect = 7e-31 Identities = 153/201 (76%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||||| |||||||| | || ||||||| |||| || |||| |||||| | Sbjct 18414 CTTTACAATCAATAGACCTTCAT-CATTCACGCGGTATTG-CTTCATCAAACTTTCGTTC 18471 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||| || ||||||||||||||| |||||||||| | || || | ||||| | ||| Sbjct 18472 ATTGTGAAAAATTCCCCACTGCTGCTTCCCGTAGGAATATGAGCCATATCTCAATCCCAT 18531 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 || | ||| ||| |||||||| |||| ||| ||| | | ||||||| || ||||| | Sbjct 18532 TGCGGCTGTTCAGCCTCTCAGCCCAGCTACCCATCATTGTCTTGGTGGGCATTTACCCCG 18591 Query 181 CCAACTAGCTAATCCGACCTA 201 ||||||| ||||| ||| || Sbjct 18592 CCAACTAACTAATGGGACATA 18612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071111065440