Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Podiceps_20cristatus_20[genbank_20GCA_5F000699545.1_202014-06-11] 82,923 sequences; 1,134,922,578 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq56606 141 9e-32 seq65150 86.0 6e-15 >seq56606 Length=2185 Score = 141 bits (156), Expect = 9e-32 Identities = 125/156 (80%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| ||||| Sbjct 1751 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGACCTACTTTCGTACCTG 1692 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| || ||||||||| |||| |||| |||| || ||| | | ||| || Sbjct 1691 CTCGACTTGTGGGTCTCGCAGTTAAGCGCGCTTTTGCCTTTATACTCTACGCGTGATTTC 1632 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||| | | ||| |||||||| ||||||||||| Sbjct 1631 CGACCACGCTGAGCGCACCTTCGTACTCCTCCGTTA 1596 >seq65150 Length=182698 Score = 86.0 bits (94), Expect = 6e-15 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| | |||||||||||||||||| ||| |||| ||||| Sbjct 128883 GTTGAGCGATGGCCCTTCCATCCGGAACCACCGGATCACTATAGCCTAATTTCTTACCTG 128824 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTAT 118 |||| || |||| ||||||||| ||||| Sbjct 128823 TTCGACTTGTTTGTCTCACAGTCAAGCACACTTAT 128789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473219549276