Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopodoces_20humilis_20[refseq_20GCF_5F000331425.1_202013-01-11] 5,406 sequences; 1,042,997,632 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 7e-15 >seq1 Length=77483305 Score = 87.8 bits (96), Expect = 7e-15 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 || ||| |||| ||||||||||||| | || |||| |||||| | | ||||| ||||||| Sbjct 64130146 GAATCGGGTTGCTTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 64130205 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||| || ||| ||||||| | | ||||| || ||| |||| | | Sbjct 64130206 ACCGGCACGAGACTGAGAGCCAACAAGTACCATAAGGGAAAGTTGCGAAGAACTTCGAAG 64130265 Query 160 AGAGAGTTAAA 170 |||||||| || Sbjct 64130266 AGAGAGTTCAA 64130276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079884041300