Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopodoces_20humilis_20[refseq_20GCF_5F000331425.1_202013-01-11]
5,406 sequences; 1,042,997,632 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq2 205 2e-50
>seq2
Length=63311091
Score = 205 bits (226), Expect = 2e-50
Identities = 205/262 (78%), Gaps = 3/262 (1%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||||||||| |||||| | |||||||||| | ||||| |||||||||| | |||||
Sbjct 3532245 TCATCAGTAGG-TAAAACCACCCTGTCTCATAGAGATCTAACCCCAGCTCACAT-CCCTA 3532188
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
| | || | | |||||||| |||| |||||||||||| || ||| ||||||| |
Sbjct 3532187 TCACAGG-TCAGCAATCCAATGCTTGGTGAATTCTGCTTCCCAGTGGTAGAAAGAGCCAA 3532129
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
|| |||||||||||||||||| | ||||||||| ||||||| | |||||||||| | ||
Sbjct 3532128 GATGGAAGGATCAAAAAGCAACATTGCTATGAACACTTGGCTACAACAAGCCAGTCACCC 3532069
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270
||||||||||||| ||| |||||| || ||||| | | | | ||| ||| |||
Sbjct 3532068 CTGTGGTAACTTTCCTGACACCTCCTGCTTCAAACACCAAAAGGCAGAAGAATCATGAGG 3532009
Query 271 CCACACTTTCATGGTTTGTATT 292
|| ||||||||||| ||||||
Sbjct 3532008 CCCCACTTTCATGGGCTGTATT 3531987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854353811136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |