Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopodoces_20humilis_20[refseq_20GCF_5F000331425.1_202013-01-11] 5,406 sequences; 1,042,997,632 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2 205 2e-50 >seq2 Length=63311091 Score = 205 bits (226), Expect = 2e-50 Identities = 205/262 (78%), Gaps = 3/262 (1%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||| |||||| | |||||||||| | ||||| |||||||||| | ||||| Sbjct 3532245 TCATCAGTAGG-TAAAACCACCCTGTCTCATAGAGATCTAACCCCAGCTCACAT-CCCTA 3532188 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 | | || | | |||||||| |||| |||||||||||| || ||| ||||||| | Sbjct 3532187 TCACAGG-TCAGCAATCCAATGCTTGGTGAATTCTGCTTCCCAGTGGTAGAAAGAGCCAA 3532129 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 || |||||||||||||||||| | ||||||||| ||||||| | |||||||||| | || Sbjct 3532128 GATGGAAGGATCAAAAAGCAACATTGCTATGAACACTTGGCTACAACAAGCCAGTCACCC 3532069 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||| ||| |||||| || ||||| | | | | ||| ||| ||| Sbjct 3532068 CTGTGGTAACTTTCCTGACACCTCCTGCTTCAAACACCAAAAGGCAGAAGAATCATGAGG 3532009 Query 271 CCACACTTTCATGGTTTGTATT 292 || ||||||||||| |||||| Sbjct 3532008 CCCCACTTTCATGGGCTGTATT 3531987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854353811136