Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopodoces_20humilis_20[refseq_20GCF_5F000331425.1_202013-01-11]
5,406 sequences; 1,042,997,632 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq35 268 3e-69
seq5 87.8 6e-15
>seq35
Length=7077570
Score = 268 bits (296), Expect = 3e-69
Identities = 177/196 (90%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
|||||||||||||||| |||||| ||| |||||| | | ||||||||||| |||||||
Sbjct 2782729 TCCCACTTATTCTACATCTCTCATGTCTCTTCACAGCGCCAGACTAGAGTCAGGCTCAAC 2782788
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
||||||||||||||||||||||||| |||||||| ||||||||||||||||||| || ||
Sbjct 2782789 AGGGTCTTCTTTCCCCGCTGATTCCACCAAGCCCCTTCCCTTGGCTGTGGTTTCACTGGA 2782848
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
|||||| ||||||||||||||||||| || |||||||||||| | |||||||||||||||
Sbjct 2782849 TAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATGCACATCACTAATTAGATGA 2782908
Query 418 CGAGGCATTTGGCTAC 433
||| ||||||||||||
Sbjct 2782909 CGACGCATTTGGCTAC 2782924
>seq5
Length=39211856
Score = 87.8 bits (96), Expect = 6e-15
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand=Plus/Plus
Query 454 TCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCA 513
|||| || | ||| || |||| |||||||||||||||||||||||||| |||| ||||
Sbjct 22788252 TCCCACCATCTACT-GCACTTGATTGAATTTCTTCACTTTGACATTCAGGGCACCAGGCA 22788310
Query 514 GAAATCACATTGCGTCAACA 533
|||||||||||| ||||||
Sbjct 22788311 GAAATCACATTGTATCAACA 22788330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635111601088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |