Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopodoces_20humilis_20[refseq_20GCF_5F000331425.1_202013-01-11] 5,406 sequences; 1,042,997,632 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq182 116 2e-20 >seq182 Length=329078 Score = 116 bits (128), Expect = 2e-20 Identities = 105/132 (80%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||| | ||||| |||||| || ||||||||||||| || ||||| ||||||| Sbjct 193802 CTCCTTGAGGCGGGGCACGCCCAGCGTGACGTTCTTGGCCGACACCCCGGCGTAGTGGAA 193861 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | |||||||| ||||||| |||||||| | | |||| |||| || ||| || Sbjct 193862 GGTGTTGAGGGTCATCTGCGTGGCCGGCTCGCCCAGGGACTGCGCCGCCAGCGCGCCGAC 193921 Query 349204 CATCTCGCCGGG 349215 |||||| ||||| Sbjct 193922 CATCTCACCGGG 193933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084591279935988