Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pterocles_20gutturalis_20[refseq_20GCF_5F000699245.1_202014-06-09] 58,607 sequences; 1,069,324,295 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq36731 109 2e-21 seq10411 93.3 2e-16 seq32093 77.0 1e-11 >seq36731 Length=28781 Score = 109 bits (120), Expect = 2e-21 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 33 CTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAA 92 |||| |||||| |||| ||||||||||||| | || |||| |||||| | | ||||| Sbjct 24380 CTTCTCCGAGTCAGGTTGCTTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAG 24439 Query 93 GCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152 |||||||| || |||||||||||| ||||||| | | ||||| ||||||| || Sbjct 24440 GCTAAATACCTGCACGAGACCGATAGCCAACAAGTACCATAAGGGAAAGTTGAAAAGAAC 24499 Query 153 TTTGGAAAGAGAGTTAAA 170 |||| | |||||||| || Sbjct 24500 TTTGAAGAGAGAGTTCAA 24517 >seq10411 Length=62011 Score = 93.3 bits (102), Expect = 2e-16 Identities = 78/92 (85%), Gaps = 4/92 (4%) Strand=Plus/Minus Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 ||| | |||||||||||||||||||| || ||| |||| |||||||||||||||||| Sbjct 18268 CTGCTAGGACCCGAAAGATGGTGAAC-AT--CTGGC-AGGGCGAAGCCAGAGGAAACTCT 18213 Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAA 654 |||||||| || |||||| ||| |||||||| Sbjct 18212 GGTGGAGGTCCGTAGCGGTCCTGACGTGCAAA 18181 >seq32093 Length=48992 Score = 77.0 bits (84), Expect = 1e-11 Identities = 80/105 (76%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 52 TTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGA 111 ||||||||||||| | || |||| || ||| | | ||||| |||||||| ||| ||| Sbjct 48 TTGGGAATGCAGCCCAAAGTGGGTGGAAAACTCCATCTAAGGCTAAATACCGGCACAAGA 107 Query 112 CCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 | |||||| ||||||| || | ||||| ||||||| | |||| Sbjct 108 CTGATAGCCAACAAGTACCGTAAGGGAAAGTTGAAAAGAATTTTG 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078742879850