Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygoscelis_20adeliae_20[refseq_20GCF_5F000699105.1_202014-06-06] 19,265 sequences; 1,216,617,519 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq18961 237 3e-60 seq18627 122 1e-25 seq18953 113 7e-23 seq18304 80.6 4e-13 seq17788 73.4 6e-11 >seq18961 Length=2182706 Score = 237 bits (262), Expect = 3e-60 Identities = 204/248 (82%), Gaps = 6/248 (2%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct 860379 GTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 860321 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA-TAGT 133 ||| || | |||||| | |||| | |||||||||||||| | | || ||| | | Sbjct 860320 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGCCGACCGCTCGG 860262 Query 134 CGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | | | ||| ||||| | | |||||||| ||||||||||||||||||||||| Sbjct 860261 GTGTCGCGTAACTAGTTAGCCTGCCAGAGTCTCGTTTGTTATCGGAATTAACCAGACAAA 860202 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 | |||||||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct 860201 TTGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCTC 860142 Query 251 AATCTGTC 258 |||||||| Sbjct 860141 AATCTGTC 860134 >seq18627 Length=7780771 Score = 122 bits (134), Expect = 1e-25 Identities = 89/101 (88%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||| || Sbjct 1932848 GTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 1932906 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||| ||| |||||| | |||| | |||||||||||||| Sbjct 1932907 CAATCTT-GGGTGGCTGAACGCCACTTGTCCCTCTAAGAAG 1932946 >seq18953 Length=5693414 Score = 113 bits (124), Expect = 7e-23 Identities = 86/100 (86%), Gaps = 5/100 (5%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||| ||| ||||| ||||||||||||||||||||||||||||| ||| | ||| || Sbjct 4803598 GTCTTGTT-GTTATTGGAATTAACCAGACAAATCACTCCACCAA----GAATGTCCAGGC 4803652 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||| |||| |||||||||| |||||||||| Sbjct 4803653 ACCACCACCCATGGAATTGAGAAAGAGCTCTCAATCTGTC 4803692 >seq18304 Length=1330411 Score = 80.6 bits (88), Expect = 4e-13 Identities = 71/86 (83%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 30 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGC 89 ||| ||||| | |||||||||||||||||||||| |||||| ||||| | || |||| Sbjct 1201367 GTGAGGCCCTGGACATCTAAGGGCATCACAGACCCATTATTG-CTCAATC-TCAGGTGGC 1201424 Query 90 TGGAAGCCAATAGTCCCTCTAAGAAG 115 || | |||| | |||||||||||||| Sbjct 1201425 TGAATGCCATTTGTCCCTCTAAGAAG 1201450 >seq17788 Length=1851887 Score = 73.4 bits (80), Expect = 6e-11 Identities = 60/73 (82%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 |||||||||||| ||| ||||| || ||||||| ||||||| ||||| ||||| ||| Sbjct 1219473 AATTAACCAGACTAATTGCTCCATCAGCTAAGAATGGCCATGTACCACTACCCAAGAAAT 1219532 Query 236 CAAGAAAGAGCTA 248 ||||||| | ||| Sbjct 1219533 CAAGAAAAAACTA 1219545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796651293465