Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygoscelis_20adeliae_20[refseq_20GCF_5F000699105.1_202014-06-06] 19,265 sequences; 1,216,617,519 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq18879 91.5 2e-16 seq18945 82.4 9e-14 >seq18879 Length=2618299 Score = 91.5 bits (100), Expect = 2e-16 Identities = 89/112 (79%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 ||| || | ||||||||| ||||| || | ||||||||| |||||||| ||| || Sbjct 2301759 CGTTTCCAAAAACCAACAGAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCAGT 2301701 Query 61 ATTCGGGCGTAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTC 111 || | |||| | |||||||||||||||||||||||||||| ||||| ||| Sbjct 2301700 ATGCCGGCGGCCGGCCTGCTTTGAACACTCTAATTTTCTCAAAGTAAACGTC 2301649 >seq18945 Length=2196376 Score = 82.4 bits (90), Expect = 9e-14 Identities = 78/97 (80%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG-T 70 ||||||||||||| || | ||||||||| |||||||| ||| |||| ||| | Sbjct 2099953 ACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCAGTATGGCAGCGGT 2099895 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||||||||||||||||||||||||||| ||||| Sbjct 2099894 CGGCCTGCTTTGAACACTCTAATTTTCTCAAAGTAAA 2099858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595088918010