Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygoscelis_20adeliae_20[refseq_20GCF_5F000699105.1_202014-06-06] 19,265 sequences; 1,216,617,519 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq18879 89.7 5e-16 seq18945 82.4 8e-14 >seq18879 Length=2618299 Score = 89.7 bits (98), Expect = 5e-16 Identities = 129/178 (72%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 9 GACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACC 67 ||| |||||||||| |||||||||| |||||||||||||| || | |||| | | Sbjct 2301649 GACGTTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCGCCGGCATACTGCAGC 2301708 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 |||||||| ||||||||| | |||||||||| ||| ||||| | | | || | || Sbjct 2301709 TAGGAATAATGGAATAGGAC-TCCGGTTCTATTCTGTTGGTTTTTGGAAACG-GGGCCAT 2301766 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||| || | ||| | ||||| | ||||| | | |||||||||||||||| Sbjct 2301767 GATTAAGAGGGACGGCTGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 2301824 >seq18945 Length=2196376 Score = 82.4 bits (90), Expect = 8e-14 Identities = 78/97 (80%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| ||| |||| | | || Sbjct 2099858 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGACCGCTGCCATACTGCAGCTAGG 2099917 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT 108 |||||| ||||||||| | |||||||||||||| ||| Sbjct 2099918 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGT 2099953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511904445600