Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygoscelis_20adeliae_20[refseq_20GCF_5F000699105.1_202014-06-06] 19,265 sequences; 1,216,617,519 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq18627 188 1e-45 seq18961 104 4e-20 seq18304 93.3 8e-17 >seq18627 Length=7780771 Score = 188 bits (208), Expect = 1e-45 Identities = 199/258 (77%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| | ||| ||||| |||||||||||||||| Sbjct 1932946 CTTCTTAGAGGGACAAGTGGCGTTCAGCC-ACCCAAGATTGAG-CAATAACAGGTCTGTG 1932889 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||||||||||||||||||||||| | || | || | | Sbjct 1932888 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 1932829 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| ||||| | | || | | ||||| |||| || | | |||| Sbjct 1932828 CCTCCGCCGGCAGGCGCAGGTAACCCGTTGAACCCCATTCGTGATGGGTATCGGGGATTG 1932769 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | ||||| |||| || |||||| ||| ||||| ||| |||||||||| Sbjct 1932768 CAATTCTTCCCCGTGAACGACGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 1932709 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 1932708 AAGTCCCTGCCCTTTGTA 1932691 >seq18961 Length=2182706 Score = 104 bits (114), Expect = 4e-20 Identities = 86/101 (85%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 860281 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 860338 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 |||||||||||||| | |||||||||||||||||||||||| Sbjct 860339 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAC 860379 >seq18304 Length=1330411 Score = 93.3 bits (102), Expect = 8e-17 Identities = 176/258 (68%), Gaps = 26/258 (10%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||| |||||||| Sbjct 1201450 CTTCTTAGAGGGACAAATGGCATTCAGCCACCTGA-GATTGAG-CAATAATGGGTCTGTG 1201393 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | ||||| ||| || | ||| || Sbjct 1201392 ATGCCCTTAGATGTCCAGGGCCTCAC----------CTT---GTGCCTAC---------- 1201356 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| || | ||| ||| || | | || | | || || ||||||| | | |||| Sbjct 1201355 CCTCCACCAGCAGGCACGGGCAACCCATTGAACCCCATTCATGATGGGGATCGGGGATTG 1201296 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 || || || | | | ||| ||||||| | |||||| ||| ||||| ||| ||| |||||| Sbjct 1201295 CATTTCTTCCCCATGAACAAGGAATGGCCAGTAAGTGCGGGTCATAAGCTCGCATTGATT 1201236 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 1201235 AAGTCCCTGCCCTTTGTA 1201218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947017521920