Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygoscelis_20adeliae_20[refseq_20GCF_5F000699105.1_202014-06-06] 19,265 sequences; 1,216,617,519 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq18028 197 5e-48 >seq18028 Length=197796 Score = 197 bits (218), Expect = 5e-48 Identities = 152/179 (85%), Gaps = 1/179 (1%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||| ||||||||||||||| | ||| |||||| | | ||||||||||| |||||| Sbjct 148236 CTCCCATTTATTCTACACCTCTGATGTCTCTTCACAGCGCCAGACTAGAGTCATGCTCAA 148295 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||| |||||||| || ||||| |||||||| |||| |||||||||||||||||| | Sbjct 148296 CAGGGTCGTCTTTCCCTGCCGATTCTGCCAAGCCTGTTCTCTTGGCTGTGGTTTCGCTGG 148355 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 ||| || ||||||||||||||||||| || |||||||||||| | |||| | || ||| Sbjct 148356 ATA-TAAGTAGGGACAGTGGGAATCTCATTCATCCATTCATGCACATCACCAGTTGGAT 148413 Score = 109 bits (120), Expect = 2e-21 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 4 GATCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTT 63 |||||| ||||| ||||||| |||||| |||| |||| | |||||| |||||| ||| Sbjct 147976 GATCTTCTGCTCCACAGGAGGCTTCTGTCCTCCCTGAGCTCGGCTTAGGGCACCTGTGTT 148035 Query 64 ATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 | ||||| |||| || | ||||||| |||||||||||||||||| |||| Sbjct 148036 ACGGTTTGACAGGCGTACTGCCCCAGTCAAACTCCCCACCTGACACTGTC 148085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634884978720