Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq52674 89.7 3e-16 seq287783 86.0 4e-15 seq287782 86.0 4e-15 seq287781 86.0 4e-15 seq287780 86.0 4e-15 seq50339 86.0 4e-15 seq134 86.0 4e-15 seq74567 77.0 2e-12 >seq52674 Length=534 Score = 89.7 bits (98), Expect = 3e-16 Identities = 67/76 (88%), Gaps = 2/76 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| | || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 324 CTCACTAAACCAATCCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 266 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 265 TAAT-CAACGCGAGCT 251 >seq287783 Length=862 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 55 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 112 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 113 TAAT-CAACGCGAGCT 127 >seq287782 Length=808 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 94 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 151 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 152 TAAT-CAACGCGAGCT 166 >seq287781 Length=870 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 153 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 210 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 211 TAAT-CAACGCGAGCT 225 >seq287780 Length=858 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 168 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 225 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 226 TAAT-CAACGCGAGCT 240 >seq50339 Length=942 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 657 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 600 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 599 TAAT-CAACGCGAGCT 585 >seq134 Length=183938 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 145656 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 145713 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 145714 TAAT-CAACGCGAGCT 145728 >seq74567 Length=714 Score = 77.0 bits (84), Expect = 2e-12 Identities = 55/61 (90%), Gaps = 2/61 (3%) Strand=Plus/Minus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGC 123 || ||||||||| ||||||||||| ||||||||||||||||||| |||| |||||| ||| Sbjct 702 CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACTTAAT-CAACGCGAGC 645 Query 124 T 124 | Sbjct 644 T 644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299941592000