Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setophaga_20coronata_20coronata_20[genbank_20GCA_5F001746935.1_20201 6-09-27] 154,686 sequences; 1,171,929,618 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq800 98.7 6e-19 >seq800 Length=74403 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||| | |||| || || |||| ||| |||| ||||| |||| Sbjct 51545 GAACCCAAAGACTTGGGTTTCCCGGGAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 51486 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 51485 GATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 51429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 277996269540