Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setophaga_20coronata_20coronata_20[genbank_20GCA_5F001746935.1_20201 6-09-27] 154,686 sequences; 1,171,929,618 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq800 255 9e-66 >seq800 Length=74403 Score = 255 bits (282), Expect = 9e-66 Identities = 208/248 (84%), Gaps = 6/248 (2%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct 51918 GTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 51860 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA-TAGT 133 ||| || | |||||| | |||| | |||||||||||||| | | || ||| | | Sbjct 51859 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGCCGACCGCTCGG 51801 Query 134 CGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | | | | ||| |||||| | | |||||||||||||||||||||||||||||||| Sbjct 51800 GGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAA 51741 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 || |||||||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct 51740 TCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCTC 51681 Query 251 AATCTGTC 258 |||||||| Sbjct 51680 AATCTGTC 51673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795605978766