Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Setophaga_20coronata_20coronata_20[genbank_20GCA_5F001746935.1_20201
6-09-27] 154,686 sequences; 1,171,929,618 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq800 95.1 1e-17
>seq800
Length=74403
Score = 95.1 bits (104), Expect = 1e-17
Identities = 143/193 (74%), Gaps = 8/193 (4%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || | ||||||||| |||||||| ||| |||| | ||||
Sbjct 51281 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCAGTATGCCGGCG 51223
Query 70 TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCACA 127
| |||||||||||||||||||||||||||| ||||| | | | || || | | |||
Sbjct 51222 GCCGGCCTGCTTTGAACACTCTAATTTTCTCAAAGTAAACGCTTCGGGCCCCGCGGGACA 51163
Query 128 C-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTCGC 182
| || ||| |||| ||| | || ||||| | |||||||| | || || |||||
Sbjct 51162 CTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTCGC 51103
Query 183 CGTGAGGCGGACC 195
| | ||||||||
Sbjct 51102 CTCGCGGCGGACC 51090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 594308080524
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |