Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporophila_20hypoxantha_20[genbank_20GCA_5F002167245.1_202017-06-05]
5,095 sequences; 1,067,760,248 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq1548 167 1e-39
seq3858 71.6 6e-11
>seq1548
Length=45218
Score = 167 bits (184), Expect = 1e-39
Identities = 98/102 (96%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| || |||||||||||||||||||| ||| ||||||||||||||||
Sbjct 18758 GGAAAAGAAACTAACGAGAATTCCCTCAGTAACGGCGAGCGAAGAGGGAAGAGCCCAGCG 18817
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||||||||||||||||||||||||||||||||||||||
Sbjct 18818 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 18859
>seq3858
Length=18945
Score = 71.6 bits (78), Expect = 6e-11
Identities = 87/112 (78%), Gaps = 15/112 (13%)
Strand=Plus/Plus
Query 5 AAGAAACTAACC-AGGATT-CCCTCA-GTAACGGCGAGTGAAC----AGGGAAGAG---- 53
|| ||||||| | |||||| |||||| ||||||| || | | |||||| |
Sbjct 10446 AAAAAACTAAACGAGGATTTCCCTCAAGTAACGGGCAGCGTATTTAGAGGGAAACGGGTC 10505
Query 54 -CCCAGCGCCGAAT--CCCCGCCCCG-CGGTGGGGCGCGGGACATGTGGCGT 101
|||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 10506 CCCCAGCGCCGAAATCCCCCGCCCCGGCGGTGGGGCGCGGGACATGTGGCGT 10557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230388994800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |