Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporophila_20hypoxantha_20[genbank_20GCA_5F002167245.1_202017-06-05]
5,095 sequences; 1,067,760,248 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq3858 82.4 8e-14
>seq3858
Length=18945
Score = 82.4 bits (90), Expect = 8e-14
Identities = 128/178 (72%), Gaps = 10/178 (6%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71
|||||||||| ||||| |||| |||||||||||||| || | |||| | | ||
Sbjct 4994 TTTACTTTGAGAAAAT-AGAGTGTTCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGG 5052
Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGA----CCGCCCGTAAT 127
|||||| ||||||||| | |||||||||||||| ||||| ||| |||| ||
Sbjct 5053 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTTTCGGGAAACGGGGCCC---AT 5108
Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
||| || | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 5109 GATTAAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 5166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511974728800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |