Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporophila_20hypoxantha_20[genbank_20GCA_5F002167245.1_202017-06-05] 5,095 sequences; 1,067,760,248 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq4689 87.8 3e-15 >seq4689 Length=21225 Score = 87.8 bits (96), Expect = 3e-15 Identities = 90/114 (79%), Gaps = 3/114 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||| |||| || || | || || | Sbjct 20958 GTACGAGAGGAACCGCAGG-TTCAGACCCCT-GGTGCGTGCGCTTGGCT-AGGAGCCACT 20902 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | ||||| |||||||||||| || ||||| |||||||||||||||||||||||| Sbjct 20901 GGCGCGAGGCTACCATCTGCGGGCTTATGACTGAACGCCTCTAAGTCAGAATCC 20848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819159566080