Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporophila_20hypoxantha_20[genbank_20GCA_5F002167245.1_202017-06-05] 5,095 sequences; 1,067,760,248 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq38 107 8e-18 >seq38 Length=438151 Score = 107 bits (118), Expect = 8e-18 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||| | ||| | ||||||||| ||||||||||||| || || || ||||||| Sbjct 283673 CTCCTTGAGGCGGGGGACGCCCAGGGTGACGTTCTTGGCCGACACCCCCGCGTAGTGGAA 283732 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | |||||||| ||||||| |||||||| | | |||| | || || ||| || Sbjct 283733 GGTGTTGAGGGTCATCTGCGTGGCCGGCTCGCCCAGGGACTGCGCGGCCAGCGCGCCCAC 283792 Query 349204 CATCTCGCCGGG 349215 |||||| ||||| Sbjct 283793 CATCTCACCGGG 283804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084599789580810