Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014- 06-06] 6,915 sequences; 1,225,041,896 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1013 120 1e-24 seq1463 107 8e-21 seq1638 93.3 2e-16 >seq1013 Length=1015449 Score = 120 bits (132), Expect = 1e-24 Identities = 119/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 654155 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 654096 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 654095 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 654036 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193 |||||||| || || ||||||| ||| | ||| Sbjct 654035 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGG 654002 >seq1463 Length=5214576 Score = 107 bits (118), Expect = 8e-21 Identities = 77/89 (87%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 ||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 2572866 GGACCGGAAAGATGGTGAACTATGCCTGGGCAGGGCAAAGCCAGAGGAAACTCTGGTGGA 2572807 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCG 657 || || ||| || ||| ||||||||||| Sbjct 2572806 GGTCCGTAGCAGTCCTGACGTGCAAATCG 2572778 >seq1638 Length=1514573 Score = 93.3 bits (102), Expect = 2e-16 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| |||||| |||||| | || ||| ||||| | | ||||| ||||||| Sbjct 1310479 GAGTCGGGTTGCTTGGGAGTGCAGCCCAAAGCGGGTAGTAAACTCCGTCTAAGGCTAAAT 1310420 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| || Sbjct 1310419 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAA 1310360 Query 160 A 160 | Sbjct 1310359 A 1310359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079851673250