Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014- 06-06] 6,915 sequences; 1,225,041,896 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq1973 170 9e-41 seq712 152 2e-35 >seq1973 Length=10080 Score = 170 bits (188), Expect = 9e-41 Identities = 99/102 (97%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 9469 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAAGAGCCCAGCG 9528 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||| |||| |||||||||| Sbjct 9529 CCGAATCCCCGCCCCGCGGTGGGGCGTGGGAAATGTGGCGTA 9570 >seq712 Length=9974483 Score = 152 bits (168), Expect = 2e-35 Identities = 95/102 (93%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| Sbjct 3677092 GGAAAAGAAACTAACCAGGATTCTCTCACTAACGGCGAGTGAAGAGGGAAGAGCCCAGCG 3677151 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 || |||||||||||| |||||||||| |||| |||||||||| Sbjct 3677152 CCAAATCCCCGCCCCACGGTGGGGCGTGGGAAATGTGGCGTA 3677193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230385063600