Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sturnus_20vulgaris_20[refseq_20GCF_5F001447265.1_202015-11-20] 2,361 sequences; 1,036,755,994 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq513 147 3e-33 >seq513 Length=162718 Score = 147 bits (162), Expect = 3e-33 Identities = 179/238 (75%), Gaps = 12/238 (5%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| || || || |||||| |||||| | Sbjct 1156 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATAACCTGCACTTACTGGGAATT-C 1213 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT----TTCAAAG 116 |||||| ||| || || |||| | | ||| ||||||| |||| ||||| | Sbjct 1214 CTCGTTCAAGGGGAAGAACTGCATTCCCCAATCTCCATCAC----AAATGGGGTTCAACG 1269 Query 117 A-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 ||||||| |||| |||| ||| | || ||||| | || | ||||| ||| Sbjct 1270 GGTTACCCGCGCCTGCCGGCGGAGGGTAGGCACAAGTTGAGTCTGTCTGCATAGCGTGCG 1329 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||||||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 1330 TGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 1386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751982800115