Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sturnus_20vulgaris_20[refseq_20GCF_5F001447265.1_202015-11-20] 2,361 sequences; 1,036,755,994 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq513 105 3e-20 >seq513 Length=162718 Score = 105 bits (116), Expect = 3e-20 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 41 AGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATA 100 |||||||| ||||||||||||| | || ||| |||||||| | ||||| |||||||| Sbjct 29223 AGTCGAGTCTCTTGGGAATGCAGCCCAAAGCGGGTGGTAAATTCCATCTAAGGCTAAATA 29282 Query 101 TTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAA 160 || |||||||||||| ||||| | || | ||||| ||||||| |||||| | | Sbjct 29283 CCAGCATGAGACCGATAGCCAACAAGCACCGTAAGGGAAAGTTGAAAAGAACTTTGAAGA 29342 Query 161 GAGAGTTAAAAAGCACGTGAA 181 ||||||| || || ||||| Sbjct 29343 GAGAGTTCAAGAGGGTGTGAA 29363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079949356550