Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sturnus_20vulgaris_20[refseq_20GCF_5F001447265.1_202015-11-20] 2,361 sequences; 1,036,755,994 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1046 89.7 2e-12 >seq1046 Length=8823 Score = 89.7 bits (98), Expect = 2e-12 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||| | ||||| ||||||||| ||||||||||||| || || || ||||||| Sbjct 7630 CTCCTTGAGGCGGGGCACGCCCAGGGTGACGTTCTTGGCCGACACCCCCGCGTAGTGGAA 7571 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTG 349185 ||| | ||| |||| ||| ||| |||||||| | | |||| Sbjct 7570 GGTGTTGAGCGTCATCTGAGTGGCCGGCTCGCCCAGGGACTG 7529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084674597841078