Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq74 127 9e-27 seq1 95.1 5e-17 >seq74 Length=13208 Score = 127 bits (140), Expect = 9e-27 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||| ||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 1006 GAGTCGGGTTGTTTGTGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 947 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| ||||||| |||| ||||| ||||||| ||| || | Sbjct 946 ACGGGCATGAGACCGATAGACGACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTGAAG 887 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || |||||||| || || ||| || || Sbjct 886 AGAGAGTTCAAGAGGACGTGAAACCGTCGAGAGGTAAACG 847 >seq1 Length=118548696 Score = 95.1 bits (104), Expect = 5e-17 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 ||||| |||||||||||||||||||||| ||||| ||||||||| ||||||||||||| Sbjct 21707154 GGACCTGAAAGATGGTGAACTATGCCTGGGTAGGGCAAAGCCAGAGAAAACTCTGGTGGA 21707213 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || | ||| | |||| || |||| | || || | ||||| |||||| || Sbjct 21707214 GGTCCATAGCCATCCTGGTATGTAAATTGTTCATCCTACCTGGGTCTAGGGGTGA 21707268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079204290800