Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq74 464 2e-128 seq122 149 2e-33 >seq74 Length=13208 Score = 464 bits (514), Expect = 2e-128 Identities = 425/521 (82%), Gaps = 22/521 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 3372 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 3431 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3432 TCCCCGAGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 3491 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 3492 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 3551 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||| |||||| |||||||||||||||| ||| ||| || | ||||| || Sbjct 3552 AGGCACGGAGCCTGCCATCGTAAGTTGATAGGGCAGACATTCGAAAGATACGTCGCCAGC 3611 Query 240 -TCAAGGCCATGCGAT-TCGTTAAGTTATTAT---GAATCACCAAGGAGCCCCG--AAGG 292 || |||| |||||| | |||| |||| || ||||||| | | || | ||| Sbjct 3612 ACCAGGGCCGTGCGATCTGCCCAAGTGGTTATCCAGAGTCACCAAAGCGTCCGGGCAAGC 3671 Query 293 GCG--TTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCAT 347 || |||| |||| |||||||| | ||| | | || || ||| | | | | ||||| Sbjct 3672 CCGGATTGG-TTTTGGTCTAATAAGTGCACGCATCCCCGGAGGTCAGCGCTCGTCAGCAT 3730 Query 348 GTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT---ACTATCAAATAAACG 404 |||||||||||||||||||||| |||||||| | | | ||| | |||||| ||| Sbjct 3731 GTATTAGCTCTAGAATTACCACAGTTATCCAAGCA--ACGGTCGAGCGATCAAAGGAACC 3788 Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT-TGCTTATACTTAGACAT 463 ||||||||||||||||||||||||||||||||||||| | || | || || |||||| Sbjct 3789 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-ACATCCGTTTGCACGCAGACAT 3847 Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||| |||||||||| Sbjct 3848 GCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 3887 >seq122 Length=5814 Score = 149 bits (164), Expect = 2e-33 Identities = 161/207 (78%), Gaps = 11/207 (5%) Strand=Plus/Plus Query 307 TCTAATAAATACACCCCTTCC--GAAGTCGGGGTTTTTAG-CATGTATTAGCTCTAGAAT 363 ||| |||||| ||| | | || || ||||| | | | | ||||||||||||||||||| Sbjct 81 TCTGATAAATGCACGCGTCCCCGGAGGTCGGCGCTCGTCGGCATGTATTAGCTCTAGAAT 140 Query 364 TACCACGGTTATCCATGTAGTA----AGGTACTATCAAATAAACGATAACTGATTTAATG 419 |||||| |||||||| | || ||| | | |||| ||| ||||||||||||||| Sbjct 141 TACCACAGTTATCCAAGGAGCGGGAGAGGAGCGACCAAAGGAACCATAACTGATTTAATG 200 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTT--AATCT 477 |||||||||||||||||||||| | | | ||||| ||| |||| ||| | || || Sbjct 201 AGCCATTCGCAGTTTCACTGTACCGCCCGTGTGTACTTCGACCTGCA-GGCATGCAAGCT 259 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||| |||||||||| Sbjct 260 TTGAGACAAGCATATG-CTACTGGCAG 285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509839702016