Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_010179.2 Length=40881 Score E Sequences producing significant alignments: (Bits) Value seq24227 95.1 3e-15 >seq24227 Length=2004 Score = 95.1 bits (104), Expect = 3e-15 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 16019 AAAGGTGGTGATGTTACTTGCAATGGCTAGAGCGATGTATAAAGAGTGGTTAGATAAGGA 16078 ||||| ||||| |||||||| |||||| |||| ||||| ||||| | | | || Sbjct 1765 AAAGGAGGTGACGTTACTTGAAATGGCAAGAGGACAATATAAGAAGTGGCTGAAGCAAGA 1824 Query 16079 TAAACTTGTACTTCTTCGAGGCTGGAAACGTGATGGTCTTACTGATGCGCAAATAGCTCA 16138 || | || | || | |||||||||||||||||| || ||||||| || || ||||| Sbjct 1825 AAATTTATTATTACTGCAAGGCTGGAAACGTGATGGACTGACTGATGAACAGATCGCTCA 1884 Query 16139 TAATATGGGAATTAG 16153 |||||| |||||||| Sbjct 1885 TAATATCGGAATTAG 1899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130640025746736