Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25]
59,587 sequences; 1,155,540,733 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq38979 178 2e-42
seq27221 167 4e-39
seq9612 123 4e-26
seq43802 105 1e-20
seq32134 89.7 9e-16
>seq38979
Length=44785
Score = 178 bits (196), Expect = 2e-42
Identities = 171/217 (79%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 77 GCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATG 136
|||| ||||||||| ||| |||||||||||||||||| | ||||| |||||| |||
Sbjct 11378 GCTCGCGTTCCCTACTAGCGGGTGAACAATCCAACGCGTGGTGAATTATGCTTCACAATG 11319
Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196
|||||||| ||||| ||||||||| ||||| || |||||||||||||| ||| ||||
Sbjct 11318 G-AGGAAGAGTTGACATTGAAGGATCAGAAAGCGACATCGCTATGAACGCTCGGCCGCCA 11260
Query 197 CAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACT 256
| |||||| |||||||||||| ||| ||||| |||||| | || ||| | | | |
Sbjct 11259 CGAGCCAGCTATCCCTGTGGTGACTGTTCTGACACCTCCTG-CTTAAAACCCAAAAGTCA 11201
Query 257 AAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||||| ||||| | || |||||| |||||||
Sbjct 11200 GAAGGATCGTGAGGCCCCGCTCCCATGGTCTGTATTC 11164
>seq27221
Length=58869
Score = 167 bits (184), Expect = 4e-39
Identities = 133/160 (83%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
|| ||||||||||||||||||| |||||||| | |||||| ||||||||| |||||||
Sbjct 27720 GTTATCAGTAGGGTAAAACTAAACTGTCTCACAGCAGTCTAATCCCAGCTCATGTTCCCT 27779
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
||||||| ||||||||||| ||||| |||||||||||| ||| |||||| ||| |
Sbjct 27780 CTTAGTGGCTGAACAATCCATCGCTTGGTGAATTCTGCTTCACAATGGTAGGAAAAGCTG 27839
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
||||| |||||| ||||||| |||| |||||| |||||
Sbjct 27840 ACATCAAAGGATTAAAAAGCGACGTTATTATGAATGCTTG 27879
>seq9612
Length=46910
Score = 123 bits (136), Expect = 4e-26
Identities = 88/101 (87%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 50 AACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCA 109
||||||||||| || |||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 17111 AACCTGTCTCACAACAGTCTAAACCCAGCTCACGTTCCGTATTAGTGGGTGAATAATCCA 17170
Query 110 ACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
| |||| |||||||||||| |||||||||||||| ||
Sbjct 17171 ATGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCTGA 17211
>seq43802
Length=112724
Score = 105 bits (116), Expect = 1e-20
Identities = 176/249 (71%), Gaps = 8/249 (3%)
Strand=Plus/Plus
Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95
|| ||| |||||||||| ||||||||| | ||||||||||||||| |||| | || |
Sbjct 67720 AGGAGGATAAAACTAACTTGTCTCATGGCTATCTAAACCCAGCTCATGTTCATTGCTAAT 67779
Query 96 GGGTGAA-CAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154
|| |||| |||| |||| ||| |||||||| || | || ||||| || | |||||
Sbjct 67780 GGCTGAATCAAT-CAACACTTGGTGAATTCTGTTTTGTGGTGGCAGGAAAAGTCAACATC 67838
Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214
||| | ||| || || || || ||| |||||||||| ||| || ||||
Sbjct 67839 AAAGAGT--TGAAGAAATTTCCCT---AATAGTTGACTGCCACAAGATGGTTTTCTCTGT 67893
Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCAC 274
||| |||| |||| || |||| || | ||| | || | | | | ||| | |||||||
Sbjct 67894 GGTGACTTCTCTGACAACTCTTGCTTAAAACCTAGAAAGTC-AGAAGATAGTGAGGCCAC 67952
Query 275 ACTTTCATG 283
||| ||||
Sbjct 67953 ACTAGCATG 67961
>seq32134
Length=29501
Score = 89.7 bits (98), Expect = 9e-16
Identities = 65/73 (89%), Gaps = 2/73 (3%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT-AAACCCAGCTCACGTTCCCT 89
|||||| |||| |||||||||||||||||| || |||| |||||||||||| |||||||
Sbjct 12714 TCATCA-TAGGATAAAACTAACCTGTCTCACAACAGTCTTAAACCCAGCTCATGTTCCCT 12656
Query 90 ATTAGTGGGTGAA 102
||||||||| |||
Sbjct 12655 ATTAGTGGGAGAA 12643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 853890888672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |