Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq38979 178 2e-42 seq27221 167 4e-39 seq9612 123 4e-26 seq43802 105 1e-20 seq32134 89.7 9e-16 >seq38979 Length=44785 Score = 178 bits (196), Expect = 2e-42 Identities = 171/217 (79%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 77 GCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATG 136 |||| ||||||||| ||| |||||||||||||||||| | ||||| |||||| ||| Sbjct 11378 GCTCGCGTTCCCTACTAGCGGGTGAACAATCCAACGCGTGGTGAATTATGCTTCACAATG 11319 Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196 |||||||| ||||| ||||||||| ||||| || |||||||||||||| ||| |||| Sbjct 11318 G-AGGAAGAGTTGACATTGAAGGATCAGAAAGCGACATCGCTATGAACGCTCGGCCGCCA 11260 Query 197 CAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACT 256 | |||||| |||||||||||| ||| ||||| |||||| | || ||| | | | | Sbjct 11259 CGAGCCAGCTATCCCTGTGGTGACTGTTCTGACACCTCCTG-CTTAAAACCCAAAAGTCA 11201 Query 257 AAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||||| ||||| | || |||||| ||||||| Sbjct 11200 GAAGGATCGTGAGGCCCCGCTCCCATGGTCTGTATTC 11164 >seq27221 Length=58869 Score = 167 bits (184), Expect = 4e-39 Identities = 133/160 (83%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 || ||||||||||||||||||| |||||||| | |||||| ||||||||| ||||||| Sbjct 27720 GTTATCAGTAGGGTAAAACTAAACTGTCTCACAGCAGTCTAATCCCAGCTCATGTTCCCT 27779 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 ||||||| ||||||||||| ||||| |||||||||||| ||| |||||| ||| | Sbjct 27780 CTTAGTGGCTGAACAATCCATCGCTTGGTGAATTCTGCTTCACAATGGTAGGAAAAGCTG 27839 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 ||||| |||||| ||||||| |||| |||||| ||||| Sbjct 27840 ACATCAAAGGATTAAAAAGCGACGTTATTATGAATGCTTG 27879 >seq9612 Length=46910 Score = 123 bits (136), Expect = 4e-26 Identities = 88/101 (87%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 50 AACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCA 109 ||||||||||| || |||||||||||||||||||||| |||||||||||||| |||||| Sbjct 17111 AACCTGTCTCACAACAGTCTAAACCCAGCTCACGTTCCGTATTAGTGGGTGAATAATCCA 17170 Query 110 ACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 | |||| |||||||||||| |||||||||||||| || Sbjct 17171 ATGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCTGA 17211 >seq43802 Length=112724 Score = 105 bits (116), Expect = 1e-20 Identities = 176/249 (71%), Gaps = 8/249 (3%) Strand=Plus/Plus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 || ||| |||||||||| ||||||||| | ||||||||||||||| |||| | || | Sbjct 67720 AGGAGGATAAAACTAACTTGTCTCATGGCTATCTAAACCCAGCTCATGTTCATTGCTAAT 67779 Query 96 GGGTGAA-CAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 || |||| |||| |||| ||| |||||||| || | || ||||| || | ||||| Sbjct 67780 GGCTGAATCAAT-CAACACTTGGTGAATTCTGTTTTGTGGTGGCAGGAAAAGTCAACATC 67838 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 ||| | ||| || || || || ||| |||||||||| ||| || |||| Sbjct 67839 AAAGAGT--TGAAGAAATTTCCCT---AATAGTTGACTGCCACAAGATGGTTTTCTCTGT 67893 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCAC 274 ||| |||| |||| || |||| || | ||| | || | | | | ||| | ||||||| Sbjct 67894 GGTGACTTCTCTGACAACTCTTGCTTAAAACCTAGAAAGTC-AGAAGATAGTGAGGCCAC 67952 Query 275 ACTTTCATG 283 ||| |||| Sbjct 67953 ACTAGCATG 67961 >seq32134 Length=29501 Score = 89.7 bits (98), Expect = 9e-16 Identities = 65/73 (89%), Gaps = 2/73 (3%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT-AAACCCAGCTCACGTTCCCT 89 |||||| |||| |||||||||||||||||| || |||| |||||||||||| ||||||| Sbjct 12714 TCATCA-TAGGATAAAACTAACCTGTCTCACAACAGTCTTAAACCCAGCTCATGTTCCCT 12656 Query 90 ATTAGTGGGTGAA 102 ||||||||| ||| Sbjct 12655 ATTAGTGGGAGAA 12643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853890888672