Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq15841 178 4e-42 seq50515 105 2e-20 >seq15841 Length=8457 Score = 178 bits (196), Expect = 4e-42 Identities = 157/196 (80%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||| || |||||||||||| | || |||||| | ||||||||||| |||||| Sbjct 4396 CTCCCATTTGTTCTACACCTCTGATGTATCTTCACAGCCCCAGACTAGAGTCATGCTCAA 4455 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||| | || |||| |||||| | |||| |||||||||||||| | | Sbjct 4456 CAGGGTCTTCTTTCTCTGCCAATTCTGCCAAGGCTGTTCTGTTGGCTGTGGTTTCCTTGG 4515 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||| ||||||||||| | ||||| ||||||| |||| | ||||||||| |||| Sbjct 4516 ATAGTAAGTAGGGACAGTGAGGATCTC----ATCCATTTATGCACATCACTAATTGGATG 4571 Query 417 ACGAGGCATTTGGCTA 432 | ||| |||||||||| Sbjct 4572 ATGAGACATTTGGCTA 4587 Score = 78.8 bits (86), Expect = 3e-12 Identities = 74/93 (80%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 21 GAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTG 80 ||| ||||||| || | |||| | |||||||||||||| |||| ||| |||| ||| Sbjct 4154 GAGGTTTCTGTCCTTCCTGAGCTCACCTTAGGACACCTGTGTTACAGTTCGACAGGTGTA 4213 Query 81 CCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 | |||| || ||||||||||| |||||| |||| Sbjct 4214 CTGCCCTAGTCAAACTCCCCA-CTGACACTGTC 4245 >seq50515 Length=265 Score = 105 bits (116), Expect = 2e-20 Identities = 100/128 (78%), Gaps = 5/128 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| |||| || |||| |||| | ||||||||||||||||||| | Sbjct 256 CTTCTGCTCCGCGGGAGGTTTCCGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 197 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||| ||| ||||||||| ||||||||||||||| | |||| |||||| | Sbjct 196 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCGCTGTC-----CCCGGAGC 142 Query 127 GGCCCGCG 134 || |||| Sbjct 141 GGGTCGCG 134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634225633376