Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25]
59,587 sequences; 1,155,540,733 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq15841 178 4e-42
seq50515 105 2e-20
>seq15841
Length=8457
Score = 178 bits (196), Expect = 4e-42
Identities = 157/196 (80%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||| || |||||||||||| | || |||||| | ||||||||||| ||||||
Sbjct 4396 CTCCCATTTGTTCTACACCTCTGATGTATCTTCACAGCCCCAGACTAGAGTCATGCTCAA 4455
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||| | || |||| |||||| | |||| |||||||||||||| | |
Sbjct 4456 CAGGGTCTTCTTTCTCTGCCAATTCTGCCAAGGCTGTTCTGTTGGCTGTGGTTTCCTTGG 4515
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
|||||| ||||||||||| | ||||| ||||||| |||| | ||||||||| ||||
Sbjct 4516 ATAGTAAGTAGGGACAGTGAGGATCTC----ATCCATTTATGCACATCACTAATTGGATG 4571
Query 417 ACGAGGCATTTGGCTA 432
| ||| ||||||||||
Sbjct 4572 ATGAGACATTTGGCTA 4587
Score = 78.8 bits (86), Expect = 3e-12
Identities = 74/93 (80%), Gaps = 1/93 (1%)
Strand=Plus/Plus
Query 21 GAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTG 80
||| ||||||| || | |||| | |||||||||||||| |||| ||| |||| |||
Sbjct 4154 GAGGTTTCTGTCCTTCCTGAGCTCACCTTAGGACACCTGTGTTACAGTTCGACAGGTGTA 4213
Query 81 CCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
| |||| || ||||||||||| |||||| ||||
Sbjct 4214 CTGCCCTAGTCAAACTCCCCA-CTGACACTGTC 4245
>seq50515
Length=265
Score = 105 bits (116), Expect = 2e-20
Identities = 100/128 (78%), Gaps = 5/128 (4%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| | |||| |||| || |||| |||| | ||||||||||||||||||| |
Sbjct 256 CTTCTGCTCCGCGGGAGGTTTCCGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 197
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||| |||| ||| ||||||||| ||||||||||||||| | |||| |||||| |
Sbjct 196 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCGCTGTC-----CCCGGAGC 142
Query 127 GGCCCGCG 134
|| ||||
Sbjct 141 GGGTCGCG 134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634225633376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |