Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq14659 111 1e-19 seq10907 105 5e-18 seq27434 89.7 4e-13 >seq14659 Length=34158 Score = 111 bits (122), Expect = 1e-19 Identities = 124/162 (77%), Gaps = 4/162 (2%) Strand=Plus/Minus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||| ||||| || ||||| || |||||||| ||||| ||||| ||||| ||||| || Sbjct 10293 GGTGTACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTCCCCAAGTTCTGCTG 10234 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 ||| ||||| | ||||| | || ||||| | ||||||||| ||||||||||| || Sbjct 10233 ATTGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTACGGCGTGCCGGTCTCCGTCTG 10174 Query 66169 GGACTCAATGATGGCGTGCCAAAGAGC-GC-GTGCCTTCACC 66208 || || ||||| |||| || ||||| || | ||||||||| Sbjct 10173 AGATTCGATGATCGCGTACC--AGAGCTGCTGGGCCTTCACC 10134 Score = 100 bits (110), Expect = 2e-16 Identities = 103/132 (78%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || |||||||| ||||||||||| |||| || || | ||||| ||||| || | Sbjct 8578 CATGAAGAGATCAGGAATCCAGAGGGCAAAGAAAAGGTCTCTGGCTCGCTGCTCTTCTTT 8519 Query 66400 GCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458 || ||| || || ||||| || |||||||||||||| ||||||||| ||||||| Sbjct 8518 CCCTGTG-TTCTTCTTTAAGTCAAGAAACTCAAAGATGTCCAAATGCCATGGCTCCAGGT 8460 Query 66459 AGATGGCGAACG 66470 ||||||| |||| Sbjct 8459 AGATGGCAAACG 8448 >seq10907 Length=223548 Score = 105 bits (116), Expect = 5e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 ||||| || ||| || || || || || ||||| | ||||||||| ||||| | || Sbjct 314 GAACCGCTGCTGCGGGACAACCCCCGCCGCTTCGTCATCTTCCCCATCCAGTATCACGAC 373 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139 ||||||| |||||||| ||||| ||||||||||||||||||| ||||||||| Sbjct 374 ATTTGGCAGATGTACAAGAAGGCCGAAGCTTCCTTCTGGACGGCGGAGGAGGT 426 Score = 96.9 bits (106), Expect = 3e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || |||| || || || ||| | | || || ||||||||||| |||||||||| Sbjct 1248 TGGAGCGGTTCGGTCAAGAAGTACAAATAACAGAAGCTCGTTGTTTCTATGGCTTCCAGA 1307 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 |||||||||| ||| | || || || ||||||||| |||| || || || ||||| | || Sbjct 1308 TTGCCATGGAAAATATACATTCAGAAATGTACAGTCTTCTTATTGACACCTACATTAAGG 1367 Query 61376 A 61376 | Sbjct 1368 A 1368 >seq27434 Length=30354 Score = 89.7 bits (98), Expect = 4e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 ||| |||||| ||||||||||| | | || || ||||||||||| ||||| |||| Sbjct 23541 TGGCACGTTTTAGTCAGGAGGTGCAGATCCCAGAAGCTCGTTGTTTCTATGGCTTTCAGA 23482 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 | ||| ||||| || ||||| ||||||||||| | ||||| || || ||||||| Sbjct 23481 TCCTCATTGAGAACGTTCACTCAGAGATGTACAGCTTGCTCATAGACACCTACATCA 23425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397279279533680