Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tinamus_20guttatus_20[refseq_20GCF_5F000705375.1_202014-08-05] 82,514 sequences; 1,047,056,493 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1524 154 3e-35 >seq1524 Length=7683 Score = 154 bits (170), Expect = 3e-35 Identities = 185/246 (75%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 ||||| ||||||||||||||||| |||| || ||| ||| |||||| ||||||| Sbjct 6101 TTTACCTTGAAAAAATTAGAGTGCTCAATGCGGGCTAATGCCTGAATACTCGTGCATGGA 6042 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||||| ||||||| | |||||||||||||||||||| | | | ||||| |||| Sbjct 6041 ATAATGAAATAGGATCT-CGGTTCTATTTTGTTGGTTTTCTGATCTGAGATAATGGTTAA 5983 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA-TTTATTG 252 ||||| | |||||| | |||| || |||||||||||||||||| || | Sbjct 5982 GAGGGACGGACGGGGGCATTCGTATCGCTGCGTGAGAGGTGAAATTCTTGGACCGTAGCG 5923 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 |||| || ||||||||||| || ||||| |||| ||||||||||| |||||||||| Sbjct 5922 -AGACGTACGACTGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCA-AGAACGAAAGT 5865 Query 313 TAGGGG 318 || || Sbjct 5864 CAGAGG 5859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914444831872