Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tinamus_20guttatus_20[refseq_20GCF_5F000705375.1_202014-08-05] 82,514 sequences; 1,047,056,493 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1524 84.2 2e-14 >seq1524 Length=7683 Score = 84.2 bits (92), Expect = 2e-14 Identities = 124/173 (72%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGA 72 ||||| ||||||||||||||| | |||| || ||| ||| |||||| |||||| Sbjct 6101 TTTACCTTGAAAAAATTAGAGTGCTCAATGCGGGCTAATGCCTGAATACTCGTGCATGGA 6042 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 ||||| ||||||| | |||||||||||||| ||||| | || | ||||| | | Sbjct 6041 ATAATGAAATAGGATCT-CGGTTCTATTTTGTTGGTTT-TCTGATCTGAGATAATGGTTA 5984 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | | ||| | |||||| | |||| || | |||||||||||||||| Sbjct 5983 AGAGGGACGGACGGGGGCATTCGTATCGCTGCGTGAGAGGTGAAATTCTTGGA 5931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511590730560