Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tinamus_20guttatus_20[refseq_20GCF_5F000705375.1_202014-08-05] 82,514 sequences; 1,047,056,493 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1524 208 1e-51 seq13196 141 2e-31 >seq1524 Length=7683 Score = 208 bits (230), Expect = 1e-51 Identities = 204/258 (79%), Gaps = 4/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | ||||| |||||| ||| |||||||||||||||| Sbjct 5473 CTTCTTAGAGGGACAAGCGGTGTTTAGCCGCATGAAGTT-GAG-CAATAACAGGTCTGTG 5416 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||| || || || | | | | Sbjct 5415 ATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTGGAGGAATCAGCGTGCTG-TAA 5357 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | ||| ||||| | ||||| | | ||| || |||| | ||||| | | |||| Sbjct 5356 CCATTACCGAAAGGTATTGGTAACCCCTTGAAAATCCTCCGTGATCGGGATCGGGAATTG 5297 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | ||| |||||||||| ||||||||| | | ||||||||| | |||||||| Sbjct 5296 CAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTGATT 5237 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 5236 ACGTCCCTGCCCTTTGTA 5219 >seq13196 Length=161287 Score = 141 bits (156), Expect = 2e-31 Identities = 165/221 (75%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| | |||| |||| |||||||| Sbjct 130944 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACACGCGCTAC 130886 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 |||||| | || | || | ||| ||||| ||| |||||| | | || | Sbjct 130885 ACTGACTGGCTCAGCTTGTGTCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCC 130826 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGC---CTAGT 282 | | ||| ||||||| | | |||||| ||||| | | | |||||||||| | | ||| Sbjct 130825 CATTTGTGATGGGGATTGGGGATTGCAGTTATTACCCATGAACGAGGAATTCCCACGAGT 130766 Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCT 323 ||| || ||||| ||| ||| ||||||| |||||| |||| Sbjct 130765 AAGTGCAGGTCATAAGCTCGCATTGATTAAGTCCCTCCCCT 130725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946418427392