Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tinamus_20guttatus_20[refseq_20GCF_5F000705375.1_202014-08-05] 82,514 sequences; 1,047,056,493 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1524 374 3e-101 >seq1524 Length=7683 Score = 374 bits (414), Expect = 3e-101 Identities = 390/504 (77%), Gaps = 11/504 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||| |||||| || || | | |||| ||| | || || ||||| | |||||||||| Sbjct 6328 GTACCCATTCCGATAACCGGCCTCAAA-GAGAACGGTCTCGTTATTTTTCGTCACTACCT 6386 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 || | | | || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6387 CCTCATTCTGAGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 6446 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||| Sbjct 6447 TCTCAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTACCCGTTACAACCATGGTA 6506 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||| || ||||||||||||||||||| |||||| | |||| || | ||||||| Sbjct 6507 GGCACATAAACTACCATCGAAAGTTGATAAGGCAGACACTTGATAGATACGTCGCCGGTA 6566 Query 241 CAAGGCCATGCGATTCGTTA-AGTTATTATGAATCACC----AAGGAGCCCCGAAGGGCG 295 || | ||||||||| | | || |||| || ||||| || | ||| | || Sbjct 6567 CATGACCATGCGATCAGCCATAGCTATTCAGAGTCACCAATTAACGGGCCAAATAACCCG 6626 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGG-GGTTTTTAGCATGTATTAG 354 | | |||| |||||||| || | | ||||| ||||||| | ||| ||||||||||| Sbjct 6627 ATTGGTTTTAATCTAATAGATGCGCTCCTTCAAAAGTCGGAGCTTTGGTGCATGTATTAG 6686 Query 355 CTCTAGAATTACCACGGTTATCCATGTAG--TAAGGTACTATCAAATAAACGATAACTGA 412 |||||||||| |||| |||||||| || | ||| || ||||| || | ||| ||| Sbjct 6687 CTCTAGAATTGCCACAGTTATCCACGTTGGATAATCAAC-ATCAAGTACATTATAGCTGT 6745 Query 413 TTTAATGAGCCATTCGCAGTTTCA-CTGTATAGATTGCTTATACTTAGACATGCATGGCT 471 | ||||||||| ||||| |||||| | | ||| || || |||||||||||||||||| Sbjct 6746 TATAATGAGCCGTTCGCGGTTTCACCATTTTAGGTTATTTGAACTTAGACATGCATGGCT 6805 Query 472 TAATCTTTGAGACAAGCATATGAC 495 || ||||||||||||||||| || Sbjct 6806 TAGCCTTTGAGACAAGCATATAAC 6829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509153708544