Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tympanuchus_20cupido_20pinnatus_20[genbank_20GCA_5F001870855.1_20201 6-11-07] 12,186 sequences; 983,776,544 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq41 109 2e-21 >seq41 Length=3895671 Score = 109 bits (120), Expect = 2e-21 Identities = 88/104 (85%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| |||||||||||||||||||||| ||||||| |||||| | | |||||||| Sbjct 1636452 AACCATAACTGATTTAATGAGCCATTTGCAGTTTTACTGTACTGCCCCTATGTACTTAGA 1636511 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||| |||||||||||||||| | ||| |||||| Sbjct 1636512 CATGCATGGCTTAACCTTTGAGACAAGCATACG-CTA-TGGCAG 1636553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510215942656