Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tympanuchus_20cupido_20pinnatus_20[genbank_20GCA_5F001870855.1_20201
6-11-07] 12,186 sequences; 983,776,544 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq41 109 2e-21
>seq41
Length=3895671
Score = 109 bits (120), Expect = 2e-21
Identities = 88/104 (85%), Gaps = 2/104 (2%)
Strand=Plus/Plus
Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460
||| |||||||||||||||||||||| ||||||| |||||| | | ||||||||
Sbjct 1636452 AACCATAACTGATTTAATGAGCCATTTGCAGTTTTACTGTACTGCCCCTATGTACTTAGA 1636511
Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||| |||||||||||||||| | ||| ||||||
Sbjct 1636512 CATGCATGGCTTAACCTTTGAGACAAGCATACG-CTA-TGGCAG 1636553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510215942656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |