Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tyto_20alba_20[refseq_20GCF_5F000687205.1_202014-05-08] 62,122 sequences; 1,120,143,088 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq12271 125 1e-26 >seq12271 Length=53543 Score = 125 bits (138), Expect = 1e-26 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 5 AAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCG 64 |||||||||| || | ||||| |||||| ||||| | |||||| |||||| |||| Sbjct 1511 AAAGGGCAGGAACTAAATCAACATGAGCTT-ATGACCCAGACTTACTGGGAATT-CCTCA 1454 Query 65 TTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCC 123 || | | || || |||||| | ||||||| ||||| ||||| | |||||| Sbjct 1453 TTCATGGGGAAGAACTGCAATCCCCAATCCCCACCACGAGTGGGGTTCAACGGGTTACCC 1394 Query 124 GGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCC 183 | |||| |||| ||| || || | ||| |||||||||||||| || ||||| Sbjct 1393 GTGCCTGCCGGCGGAGGGTATGCACCAGCTGAGCCAGTCAGTGTAGCGCGCATGTGGCCC 1334 Query 184 AGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 1333 CGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 1285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751547441230