Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tyto_20alba_20[refseq_20GCF_5F000687205.1_202014-05-08] 62,122 sequences; 1,120,143,088 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq12271 104 4e-20 >seq12271 Length=53543 Score = 104 bits (114), Expect = 4e-20 Identities = 171/243 (70%), Gaps = 3/243 (1%) Strand=Plus/Plus Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGG-CCTTTGCTCGAATACATTAGCATGGAAT 135 ||| ||| ||||||||||||||||||||||| | ||| | |||| || ||||| Sbjct 628 ACTCTGAGAAAATTAGAGTGTTCAAAGCAGGTCAGCCGCTGGCATACTGCAGGTAGGAAT 687 Query 136 AATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATA 195 ||| ||| ||||| | | ||||||| ||||||||| || | | | || |||| | Sbjct 688 AATGGAACAGGAC-TCTGTTTCTATTCTGTTGGTTTTCAGAAATGGGGCTATTATTAGGA 746 Query 196 GGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAG 255 | | | | | |||| | |||| ||| |||||||||||||||||| | ||| Sbjct 747 GTGGTGGCCAGGGGCATTCATATTGTGCTGTTAGAGGTGAAATTCTTGGACCTGCGCAAG 806 Query 256 ACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 ||| ||||||| ||| ||||| ||||| |||||||||| |||| ||||| || Sbjct 807 GTGGCCTAGAGCGAAAGTGTTTGCCAAGAATGTTCTCATTAATCA-AGAACAAAAGTCAG 865 Query 316 GGG 318 || Sbjct 866 AGG 868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914631459456